CDS

Accession Number TCMCG007C06175
gbkey CDS
Protein Id XP_018515453.2
Location join(6408777..6409067,6409434..6409910,6410121..6410334,6410418..6410575,6410768..6410835,6410929..6411034,6411178..6411261,6411362..6411973,6412063..6412116,6412267..6412363,6412706..6412875,6412958..6413044,6413206..6413271,6413344..6413402,6413482..6413569)
Gene LOC103859271
GeneID 103859271
Organism Brassica rapa

Protein

Length 876aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018659937.2
Definition RNA polymerase II C-terminal domain phosphatase-like 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description C-terminal domain phosphatase-like 1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K18998        [VIEW IN KEGG]
EC 3.1.3.16        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004647        [VIEW IN EMBL-EBI]
GO:0004721        [VIEW IN EMBL-EBI]
GO:0004722        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006470        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008420        [VIEW IN EMBL-EBI]
GO:0009611        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009738        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070940        [VIEW IN EMBL-EBI]
GO:0071215        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0097306        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTATAACAGTAATAGAGTGCAAGTGTACCATGAAGATGTGAGGGTTGGGGAGATGGAGATACACCCTCTAAAGGAAGACGATGTGTTGAAGGAGAGGAAGAAGAGAGTAATGGAGGAAGTGAAGATGGGAATCAAAATTAGCGGTTTTTCTCAACCAAGCAAGAGATGCACTCCTCTTTCAGTACTTACTACCATTTCATCTTCTGGACTTTGTTTCAAACTTGAAGCTACTACTGCTGCTCATGACCCTCTCAGTGTCTTCCACTCGTCGTGTCTTAGGGACCAGAAGACTGCAGTAATGTCCCTTGGTGGAGAAGAGCTCCATTTGGTTGCCATGTGCTCGGAGGATATCAACAATGACCGTCCTTGTTTCTGGGCGTTTACTGTTGCTCCTGGAATGTATGATTCCTGTCTTGGCATGTTGAATCTTAGATGCCTGGGGATTGTGTTTGATCTTGATGAGACCCTCGTAGTGGCCAATACCCTGCACACATTTGAGGTTAAAATGGAGGGGTTGCTCCGGAGAATGAGCAGCGAGGTGGACCCTCGACGCCGTGCCGTTATGGTGGCTCAGATGAAGCGTTATCAGGATGACAAAAATCTGTTAAAGCAATACGTTGAAAGTGACCAGGTTGTTGAAAACGGGGAGGTGATTAAAGCACAGTCTGAAATTGTCCCTGCCTTGTCTGACAACCATCAGCCTCTTGTTCGTTCTCTGATAAGGTTGCAAGAGAAGAACATTGTCTTGACTCGCATTAATCCAATGAAACGTGATACAAGTGTTCTTGTGAGGTTGAGGACTTCATGGGAGGAACTTCGAAGCTATTTGACAGCAAAAGAGCAGCGCAAGCGTTTTGAAGTATATGTTTGCACAATGGCTGACAAAGATTACGCCTTAGAGATGTGGAGGCTCCTCGATCCAGAAGGGAATTTGATAAACGCAAATGACTTGCTGGCTCGCATTGTTTGTGTGAAATCTGGTTTTAAGAAGTCATTGTTCAATGTGTTTCTCAATGCCACCTGCCATCCGAAGATGGCACTGGTAATTGATGATCGCCGGGAAGTTTGGGACGAGAAGGATCAGCCAAGGGTGCATGTGGTTCGTGCATTTGCTCCCTACCATTCTCCTAAAGCTGAAGCAGCTGCAACACCGGTACTGTGCGCTGCCAAAAATCTTGCTTGCGTTGTCAGAACTGGATTTTTCAAGCATTTCGATGATAGTCTGCTACCAAGGATTGCTGAAATATCTTATGAGAATGATGTTGAAGATATTCCATCACCTCCTGATGTAAGCCATTACTTGGTGTCTGAGGACGTGACATCTGGTTTAAATGGAAACAAAGATCCACTTTCTAGTGACAAGATGGCTGATGCTGGAGTGGGGAGAATACTGAAGGAGGCAATTTGTGGATCTTCAGCTGCCCTTCCGGCGGCAAATACAGATCCAAGAATAGCTGCTCCCGTTCAGCAACCCATTGCTTCTGCTTCTTATGTTTCCGCTCCAGTACCAGTACCAGTACCAGTACCAGCACCAGTCCCAGTCCCAGTCATGCAACAAGCACCGCAACCCATTGCTTCTGCTTCTTATGTTTCCGCTCCAGTACCAGTACCAGTACCAGCACCAGTCCCAGTCCCAGTCATGCAACAAGCACCGCAACCATCAGCTATCGCCCTTCCAAGCATTCAGTTTCAACAACCGGCAATAGTAGCTACACACTTGGTTCCCTCAGAGACAAGTTTGCAAAATTCTCCGGCTAGTGAAGGTGAGGTACCTGAATCAGAGTTAGATCTAGATACCAGGAGGAGGCTCCTCATATTGAAACATGGACAAGATCCCAGAGATGCTGCTCCAAGTGAACCTTCATTTCCAAAGAGACCGCCAGTTCAAGCTCCACCTCCACGTGTGCAGCCAAGAAATGGTTGGTTTGCTGCTGAGGAGGAGATGGATCCAAAAACAGAGAATCCCGTTGGATTACTGCATGAGATTGCTATTAAATGTGGAACTAAGGTGGACTACAAACCGGGTTTGGTTGCTAGTACAAATATGCGGTTCTCTATTGAGGCTTGGTTTTGTGGTAAAAAAATTGGAGTAGGGATTGGCAAATCGAGACGAGAAGCCCTGCAGAAGGCTGCTGAATTTTCAATCCAGAACTTAGCTGATATATATTTGTCTCGTGAAAATGGCGATGCAGGACCAAGTCACAGGGATGCAGGCCCCCTTACTAATCAGCCATCTGCCGGAGATGAAACAGCGATGCCAGTTGCTACATATACAAGATTAGAAGGCTCTATTAGGCACAATGGCTCCATTCCTACGCTCAGGGAACTGTGTGCATCGGAAGGTTGGGAGCTGTCTTTTCAATCTCAGCGTCCACTTCATTCTGACATGGTCCACACTGAAGAATTTCATGCTAAGGTTGCAATAAATGGACGTGTTTTAGGGGAAGGAGTTGGATCAACATGGGAGAAAGCTAGAATGAATGCTGCTGAGAGAGCACTGGGTAATGTGGGACCATTGCTTCAACGACAAGTATCTTCAAGATCGTTCGGTGGGAAGTCAAACAAGCGTCTGAAGCCAAACTTTCAACGGTCCATGCAACGGATGGCATCTTCAGGAAGATCCTCTTAA
Protein:  
MYNSNRVQVYHEDVRVGEMEIHPLKEDDVLKERKKRVMEEVKMGIKISGFSQPSKRCTPLSVLTTISSSGLCFKLEATTAAHDPLSVFHSSCLRDQKTAVMSLGGEELHLVAMCSEDINNDRPCFWAFTVAPGMYDSCLGMLNLRCLGIVFDLDETLVVANTLHTFEVKMEGLLRRMSSEVDPRRRAVMVAQMKRYQDDKNLLKQYVESDQVVENGEVIKAQSEIVPALSDNHQPLVRSLIRLQEKNIVLTRINPMKRDTSVLVRLRTSWEELRSYLTAKEQRKRFEVYVCTMADKDYALEMWRLLDPEGNLINANDLLARIVCVKSGFKKSLFNVFLNATCHPKMALVIDDRREVWDEKDQPRVHVVRAFAPYHSPKAEAAATPVLCAAKNLACVVRTGFFKHFDDSLLPRIAEISYENDVEDIPSPPDVSHYLVSEDVTSGLNGNKDPLSSDKMADAGVGRILKEAICGSSAALPAANTDPRIAAPVQQPIASASYVSAPVPVPVPVPAPVPVPVMQQAPQPIASASYVSAPVPVPVPAPVPVPVMQQAPQPSAIALPSIQFQQPAIVATHLVPSETSLQNSPASEGEVPESELDLDTRRRLLILKHGQDPRDAAPSEPSFPKRPPVQAPPPRVQPRNGWFAAEEEMDPKTENPVGLLHEIAIKCGTKVDYKPGLVASTNMRFSIEAWFCGKKIGVGIGKSRREALQKAAEFSIQNLADIYLSRENGDAGPSHRDAGPLTNQPSAGDETAMPVATYTRLEGSIRHNGSIPTLRELCASEGWELSFQSQRPLHSDMVHTEEFHAKVAINGRVLGEGVGSTWEKARMNAAERALGNVGPLLQRQVSSRSFGGKSNKRLKPNFQRSMQRMASSGRSS